
Sourdough Discard Veggie Pizza Muffins
Tender, tangy savory muffins made with unfed sourdough discard, studded with bell pepper, onion and mozzarella, then finished with a spoonful of pizza sauce and melted cheese on top. A great way to use up discard for lunchboxes and snacks.
- Prep
- 25 min
- Cook
- 23 min
- Wait
- 10 min
- Total
- 58 min
- Makes
- 12 standard muffins
Steps
Before you start
- Use unfed sourdough discard at about 100% hydration (equal weights flour and water), straight from the fridge or at room temperature. It can be any age, but if it smells sharply of acetone, expect a stronger tang.
- Take the eggs and milk out of the fridge 20–30 minutes ahead so the batter mixes smoothly.
- Shred your own low-moisture mozzarella from a block if you can; fresh mozzarella is too wet and will make soggy muffins.
- Pat the diced vegetables dry so they don't add extra water to the batter.
Heat oven, prep panOven 375°F / 190°C
- Position a rack in the center of the oven and heat to 375°F (190°C).
- Line a 12-cup standard muffin pan with paper or silicone liners, or grease each cup well with nonstick spray.
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Ready when: Oven reads 375°F (190°C) and the pan is ready to fill.
Tip: Paper liners can stick to cheesy muffins; lightly spraying them helps.
Dice and dry vegetables
- Cut the bell pepper into ¼-inch (6 mm) dice and finely dice the red onion.
- Spread both on a clean towel or paper towels and press to blot off surface moisture.
- Shred the mozzarella if needed and divide it: 1 cup (113 g) for the batter and ½ cup (57 g) for the topping.
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Ready when: Vegetable pieces are small, even and feel dry to the touch.
Tip: Keep the dice small; big chunks make the muffins crumble when you bite them.
Whisk dry ingredients
- In a large bowl, whisk together the flour, baking powder, baking soda, salt, oregano and garlic powder for 20–30 seconds until the seasonings are evenly distributed and there are no lumps.
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Ready when: Mixture looks uniformly speckled with green herbs.
Mix wet ingredients
- In a medium bowl, whisk the sourdough discard, milk, olive oil and eggs until smooth and no streaks of egg remain, about 1 minute.
- Whisk in ¼ cup (60 g) pizza sauce until the mixture is evenly pink-orange.
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Ready when: Mixture is smooth, uniform in color and pourable.
Tip: If the olive oil separates, whisk again just before combining.
Fold batter together
- Pour the wet mixture into the dry ingredients.
- With a rubber spatula, fold about 10–12 strokes, just until most of the flour disappears.
- Add the bell pepper, onion, 1 cup (113 g) mozzarella and the Parmesan, and fold 4–5 more strokes until evenly distributed.
- The batter will be thick and scoopable, like a thick pancake batter.
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Ready when: No dry flour pockets remain; a few small lumps are fine.
Tip: Don't overmix, or the muffins turn tough and rubbery.
Fill muffin cups
- Use a ¼-cup scoop or measuring cup to portion about 2 scoops (roughly ½ cup / 110 g) of batter into each cup, filling them to just below the rim.
- Smooth the tops lightly with the back of a spoon.
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Ready when: All 12 cups are filled evenly, about three-quarters to fully full.
Tip: Make sure vegetable pieces aren't sticking up too far; they can brown or scorch.
First bakeOven 375°F / 190°C
- Bake the muffins at 375°F (190°C) for 18 minutes, rotating the pan front to back at the 9-minute mark if your oven bakes unevenly.
- The tops should be set and pale golden but not yet fully browned.
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Ready when: Tops are set and spring back slightly when pressed; edges are lightly golden.
Tip: Avoid opening the oven in the first 10 minutes so the muffins rise well.
Top and finish bakingOven 375°F / 190°C
- Quickly pull out the pan.
- Spoon about 1 teaspoon of pizza sauce onto the center of each muffin (¼ cup / 60 g total), then sprinkle with the ½ cup (57 g) mozzarella and a pinch of oregano if you like.
- Return to the 375°F (190°C) oven for 5 more minutes.
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Ready when: Cheese is melted and bubbling with golden spots, and a toothpick in the center comes out clean (not counting melted cheese or sauce); internal temperature reads 205°F (96°C).
Tip: Keep the sauce topping thin so it doesn't slide off or make the tops soggy.
Cool and release
- Set the pan on a wire rack for 5 minutes.
- Run a small knife around the edge of each muffin, lift them out, and cool on the rack for another 5 minutes before eating so the cheese sets.
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Ready when: Muffins lift out easily and are warm, not piping hot.
Tip: Don't leave them in the hot pan longer than 5 minutes or the bottoms will steam and turn soggy.
Good to know
Tips
- Use thick pizza sauce. Thin sauce adds extra water and can make the crumb gummy.
- Shred mozzarella yourself; pre-shredded cheese is coated in starch and can make the batter drier.
- For crispier cheesy edges, grease the muffin cups directly instead of using paper liners.
- Active discard works too: a fed, bubbly starter gives a slightly lighter crumb with less tang.
Make ahead
"Mix the dry ingredients and prep the vegetables and shredded cheese up to 1 day ahead; store the vegetables and cheese covered in the fridge. Combine and bake just before serving, as the baking powder begins working once wet. Fully baked muffins can also be made 2 days ahead and reheated."
Storage & reheating
"Room temperature: up to 2 hours after baking. Fridge: store airtight for up to 4 days. Freezer: freeze cooled muffins on a tray, then bag for up to 3 months. Reheat refrigerated muffins at 350°F (175°C) for 8–10 minutes, or frozen ones for 15–18 minutes, until hot in the center; or microwave one muffin for 20–30 seconds (refrigerated) or 45–60 seconds (frozen)."
Substitutions
- all-purpose flour → Half whole wheat flour (120 g) and half all-purpose flour (120 g). Gives a nuttier, slightly denser muffin; add 1–2 tablespoons extra milk if the batter seems stiff.
- whole milk → Unsweetened plain plant milk or buttermilk. Same amount (180 ml). Buttermilk adds extra tang.
- red or green bell pepper → Diced zucchini (squeezed dry), mushrooms or sliced black olives. Use the same volume; squeeze or blot well to keep the batter from getting wet.
- extra-virgin olive oil → Melted butter or neutral oil. Use the same amount; butter adds richness and olive oil adds a more savory flavor.
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- Meal
- Snack
- Cuisine
- American
- Main ingredient
- MozzarellaBell Peppers
- Method
- Oven
- Quick & Easy
- Easy





